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IDSGR_3644 TypeCDS
From4262302 nt length3528
To4258775 aa length1175
GenecydCD pI6.7
Definitionputative ABC transporter ATP-binding protein and permease component M.W (Da)123436
Note AseI frg.M
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4258 putative ABC transporter ATP-binding protein12950.0e+00
coelSCO3947 putative ABC transporter14770.0e+00
samSAM23877_3717 Transport ATP-binding protein CydCD14540.0e+00
kanCP970_21745 thiol reductant ABC exporter subunit CydD14280.0e+00
scabSCAB46421 putative ABC transporter ATP-binding protein14240.0e+00
saceSACE_0144 putative ABC transporter ATP-binding protein3353.0e-92
nfarnfa5870 putative ABC transporter ATP-binding protein3204.0e-88

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran2ABC transporter350-499, 950-1095218.43.9e-65

ABC_membrane2ABC transporter transmembrane region22-274, 647-866131.34.5e-38

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380055.1 thiol reductant ABC exporter subunit CydD [Streptomyces gris... 40130.0e+00
WP_043391943.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 40090.0e+00
WP_069456001.1 thiol reductant ABC exporter subunit CydD [Streptomyces gris... 40080.0e+00
WP_202549316.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 40070.0e+00
WP_003967829.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 40050.0e+00
SEE79077.1 ATP-binding cassette, subfamily C, CydCD [Streptomyces griseus] ... 40030.0e+00
WP_030701332.1 thiol reductant ABC exporter subunit CydD [Streptomyces gris... 40000.0e+00
WP_093685137.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 39960.0e+00
WP_202464078.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 39910.0e+00
WP_161185263.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 39840.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear