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IDSGR_3705 TypeCDS
From4329913 nt length2046
To4331958 aa length681
GenegyrB pI5.07
DefinitionDNA gyrase subunit B M.W (Da)74591
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4321 putative DNA gyrase subunit B11540.0e+00
coelSCO3874 gyrB DNA gyrase subunit B12150.0e+00
samSAM23877_3784 DNA gyrase subunit B12090.0e+00
kanCP970_21380 DNA topoisomerase (ATP-hydrolyzing) subunit B12380.0e+00
scabSCAB45761 putative DNA gyrase subunit B12070.0e+00
saceSACE_0008 DNA gyrase subunit B8130.0e+00
nfarnfa60 putative DNA gyrase B subunit8710.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_gyraseB1DNA gyrase B260-432206.71.6e-61

DNA_gyraseB_C1DNA gyrase B subunit, carboxyl terminus612-67086.96.7e-25

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase52-19171.85.9e-20

Toprim1Toprim domain461-57261.85.2e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
BAG20534.1 putative DNA gyrase subunit B [Streptomyces griseus subsp. grise... 32720.0e+00
WP_003967890.1 MULTISPECIES: DNA topoisomerase (ATP-hydrolyzing) subunit B ... 32690.0e+00
WP_202464129.1 MULTISPECIES: DNA topoisomerase (ATP-hydrolyzing) subunit B ... 32640.0e+00
WP_219205903.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptomyces ... 32620.0e+00
WP_073799903.1 MULTISPECIES: DNA topoisomerase (ATP-hydrolyzing) subunit B ... 32470.0e+00
EHM30852.1 DNA gyrase subunit B [Streptomyces sp. W007] 32400.0e+00
WP_032790321.1 MULTISPECIES: DNA topoisomerase (ATP-hydrolyzing) subunit B ... 32390.0e+00
WP_215103611.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptomyces ... 32360.0e+00
WP_050359847.1 MULTISPECIES: DNA topoisomerase (ATP-hydrolyzing) subunit B ... 32350.0e+00
APD71189.1 GyrB, partial [Streptomyces sp.] 32350.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear