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IDSGR_3713 TypeCDS
From4340478 nt length549
To4339930 aa length182
Gene pI6.27
Definitionputative DNA-binding protein M.W (Da)19045
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4327 putative DNA-binding protein2392.0e-64
coelSCO3859 putative DNA-binding protein2761.0e-75
samSAM23877_3796 putative DNA-binding protein3011.0e-106
kanCP970_21270 DNA-binding protein3061.0e-108
scabSCAB45671 putative DNA-binding protein3105.0e-86

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_219205906.1 DNA-binding protein [Streptomyces griseus] >lcl 6822.5e-89
WP_097865613.1 DNA-binding protein [Streptomyces sp. rh34] 6804.0e-89
WP_073867188.1 MULTISPECIES: DNA-binding protein [unclassified Streptomyces... 6796.0e-89
WP_003967897.1 MULTISPECIES: transcriptional regulator [Streptomyces] >gb 6788.0e-89
WP_047177641.1 transcriptional regulator [Streptomyces sp. MNU77] >gb 6788.6e-89
WP_032790318.1 MULTISPECIES: transcriptional regulator [Streptomyces] >gb 6789.1e-89
WP_073799908.1 MULTISPECIES: DNA-binding protein [unclassified Streptomyces... 6761.8e-88
WP_024489493.1 MULTISPECIES: transcriptional regulator [Streptomyces] >gb 6762.0e-88
WP_164612467.1 DNA-binding protein [Streptomyces sp. SID14515] >gb 6752.8e-88
WP_030575924.1 MULTISPECIES: transcriptional regulator [Streptomyces] >gb 6744.1e-88

PSORT result

LocalizationCertaintyPSORT said
Not Clear