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IDSGR_3797 TypeCDS
From4432960 nt length414
To4433373 aa length137
Gene pI11.73
Definitionconserved hypothetical protein M.W (Da)14792
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6241 hypothetical protein1351.0e-33
coelSCO1991 hypothetical protein1721.0e-44
samSAM23877_2073 hypothetical protein1374.0e-42
kanCP970_32870 RNA-binding S4 domain-containing protein1674.0e-55
scabSCAB69141 hypothetical protein1292.0e-31
nfarnfa55940 hypothetical protein1505.0e-38

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

S41S4 domain13-5944.29.9e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003967980.1 MULTISPECIES: RNA-binding protein S4 [Streptomyces] >gb 5325.0e-68
WP_093562525.1 RNA-binding protein [Streptomyces sp. OspMP-M43] >emb 5282.4e-67
WP_006125885.1 MULTISPECIES: RNA-binding protein S4 [Streptomyces] >gb 4952.0e-62
WP_164205595.1 RNA-binding S4 domain-containing protein [Streptomyces parvu... 4952.4e-62
WP_030563238.1 RNA-binding protein S4 [Streptomyces cyaneofuscatus] 4925.8e-62
WP_032764500.1 MULTISPECIES: RNA-binding protein S4 [Streptomyces] >emb 4918.8e-62
WP_103507849.1 MULTISPECIES: RNA-binding protein [unclassified Streptomyces... 4901.2e-61
WP_202591248.1 MULTISPECIES: RNA-binding S4 domain-containing protein [uncl... 4901.3e-61
WP_073875039.1 MULTISPECIES: RNA-binding protein [unclassified Streptomyces... 4901.4e-61
WP_217222030.1 RNA-binding S4 domain-containing protein [Streptomyces anula... 4891.6e-61

PSORT result

LocalizationCertaintyPSORT said
Not Clear