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IDSGR_3904 TypeCDS
From4583923 nt length2043
To4581881 aa length680
Gene pI5.83
Definitionconserved hypothetical protein M.W (Da)69124
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4117 putative membrane protein4111.0e-115
samSAM23877_3570 putative membrane protein4094.0e-135
kanCP970_22960 sigma-70 family RNA polymerase sigma factor4328.0e-144
scabSCAB49101 putative membrane protein5881.0e-168
saceSACE_6488 hypothetical protein2204.0e-58

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

NPCBM1NPCBM/NEW2 domain556-67786.91.2e-24

Sigma70_r21Sigma-70 region 2125-19334.89.2e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_164360900.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 18010.0e+00
WP_159402343.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 17970.0e+00
WP_012380228.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 17950.0e+00
WP_161186322.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 17940.0e+00
WP_030701531.1 sigma-70 family RNA polymerase sigma factor [Streptomyces gr... 17820.0e+00
WP_141716259.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 17760.0e+00
WP_003968070.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 17640.0e+00
WP_093684531.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 17630.0e+00
WP_210993526.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 16220.0e+00
WP_190006783.1 sigma-70 family RNA polymerase sigma factor [Streptomyces an... 16220.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear