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IDSGR_3974 TypeCDS
From4661748 nt length657
To4662404 aa length218
GeneamfC pI6.69
Definition M.W (Da)23817
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4026 putative AmfC protein1841.0e-47
coelSCO4184 amfC aerial mycelium formation2161.0e-57
samSAM23877_3509 Aerial mycelium formation protein2242.0e-75
kanCP970_23345 ABC transporter substrate-binding protein2422.0e-82
scabSCAB49711 putative AmfC protein2184.0e-58
saceSACE_7115 aerial mycelium formation994.0e-22

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380278.1 MULTISPECIES: hypothetical protein [Streptomyces] >dbj 9262.5e-125
EGE43581.1 AmfC protein [Streptomyces sp. ACT-1] >emb 9254.5e-125
WP_203608016.1 ABC transporter substrate-binding protein [Streptomyces anul... 9141.6e-123
WP_179888552.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 9089.9e-123
WP_225051311.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 8871.7e-119
RDL10349.1 hypothetical protein DER30_3841 [Streptomyces sp. HB202] 8871.8e-119
WP_217689981.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 8853.9e-119
WP_202520288.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 8837.7e-119
WP_217691656.1 MULTISPECIES: ABC transporter substrate-binding protein [unc... 8811.5e-118
WP_225679349.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 8774.8e-118

PSORT result

LocalizationCertaintyPSORT said
Not Clear