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IDSGR_4062 TypeCDS
From4752897 nt length510
To4753406 aa length169
Gene pI10.81
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)18708
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4996 putative RNA polymerase ECF sigma factor2122.0e-56
samSAM23877_4808 putative RNA polymerase ECF sigma factor2098.0e-71

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4103-15554.65.6e-15

Sigma70_r41Sigma-70, region 4108-15750.11.3e-13

Sigma70_r21Sigma-70 region 229-7933.62.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003968236.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 7712.1e-103
WP_097936282.1 MULTISPECIES: SigE family RNA polymerase sigma factor [uncla... 7573.0e-101
WP_050356791.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 7521.7e-100
WP_219206021.1 SigE family RNA polymerase sigma factor, partial [Streptomyc... 7502.5e-100
WP_218785444.1 SigE family RNA polymerase sigma factor [Streptomyces sp. WY... 7401.3e-98
WP_030087994.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 7364.6e-98
WP_097965755.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 7365.2e-98
WP_137234997.1 MULTISPECIES: SigE family RNA polymerase sigma factor [uncla... 7357.8e-98
WP_030625750.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 7349.7e-98
WP_103508156.1 SigE family RNA polymerase sigma factor [Streptomyces sp. SM... 7322.1e-97

PSORT result

LocalizationCertaintyPSORT said
Not Clear