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IDSGR_4070 TypeCDS
From4761554 nt length882
To4762435 aa length293
Gene pI6.18
Definitionputative DNA-binding protein M.W (Da)32382
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4649 putative DNA-binding protein4201.0e-118
coelSCO3421 hypothetical protein4483.0e-127
samSAM23877_4143 hypothetical protein4582.0e-165
kanCP970_19260 XRE family transcriptional regulator4942.0e-179
scabSCAB39941 4532.0e-128
saceSACE_6607 transcriptional regulator, XRE family2953.0e-81
nfarnfa26020 putative DNA-binding protein2731.0e-74

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain22-8450.81.5e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380340.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 15080.0e+00
WP_203609345.1 Scr1 family TA system antitoxin-like transcriptional regulat... 15070.0e+00
WP_202464610.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14970.0e+00
WP_203686996.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14880.0e+00
WP_202520431.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14840.0e+00
WP_203665715.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14730.0e+00
WP_003968244.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14720.0e+00
WP_201045932.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14700.0e+00
WP_047177304.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14700.0e+00
WP_073960874.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14670.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear