-- | --

IDSGR_4140 TypeCDS
From4839959 nt length801
To4840759 aa length266
Gene pI7.63
Definitionputative ABC transporter permease protein M.W (Da)27862
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4723 putative ABC transporter permease protein3246.0e-90
coelSCO3338 putative integral membrane protein3531.0e-98
samSAM23877_4222 putative integral membrane protein3652.0e-129
kanCP970_18845 ABC transporter permease3486.0e-123
scabSCAB39231 putative ABC transporter permease protein3648.0e-102
nfarnfa19880 putative transporter2331.0e-62

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter33-229118.22.9e-34

ABC2_membrane_31ABC-2 family transporter protein66-25873.31.7e-20

ABC2_membrane_21ABC-2 family transporter protein73-26038.19.5e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003968323.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 10091.7e-136
WP_164360976.1 ABC transporter permease [Streptomyces griseus] >gb 10041.1e-135
WP_093565045.1 ABC transporter permease [Streptomyces sp. OspMP-M43] >emb 10004.4e-135
WP_093683945.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 9995.1e-135
WP_218785417.1 ABC transporter permease [Streptomyces sp. WY228] >gb 9562.4e-128
WP_030087834.1 MULTISPECIES: ABC transporter permease [Streptomyces] 9535.9e-128
WP_218525939.1 ABC transporter permease [Streptomyces sp. MW-W600-10] >lcl 9527.3e-128
WP_007456931.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 9466.0e-127
WP_097870369.1 ABC transporter permease [Streptomyces sp. rh34] 9466.1e-127
WP_103538049.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 9467.8e-127

PSORT result

LocalizationCertaintyPSORT said
Not Clear