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IDSGR_4185 TypeCDS
From4892024 nt length1194
To4893217 aa length397
Gene pI8.75
Definitionconserved hypothetical protein M.W (Da)43346
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4753 hypothetical protein7230.0e+00
coelSCO3299 hypothetical protein7260.0e+00
samSAM23877_4256 RNA-splicing ligase RtcB7340.0e+00
kanCP970_18555 RtcB family protein7080.0e+00
scabSCAB38881 7240.0e+00
saceSACE_3596 hypothetical protein5408.0e-155
nfarnfa13690 hypothetical protein5222.0e-149

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RtcB1tRNA-splicing ligase RtcB29-397428.62.6e-128

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380415.1 MULTISPECIES: RtcB family protein [Streptomyces] >dbj 21260.0e+00
WP_003968383.1 MULTISPECIES: RtcB family protein [unclassified Streptomyces... 21230.0e+00
WP_093685518.1 MULTISPECIES: RtcB family protein [unclassified Streptomyces... 21220.0e+00
WP_093563169.1 RtcB family protein [Streptomyces sp. OspMP-M43] >emb 21160.0e+00
WP_097923241.1 MULTISPECIES: RtcB family protein [unclassified Streptomyces... 20980.0e+00
WP_032794808.1 MULTISPECIES: RtcB family protein [unclassified Streptomyces... 20970.0e+00
WP_103533578.1 RtcB family protein [Streptomyces sp. SM11] 20950.0e+00
WP_215111314.1 RtcB family protein [Streptomyces sp. McG3] >lcl 20930.0e+00
WP_030577032.1 RtcB family protein [Streptomyces anulatus] 20890.0e+00
WP_217232229.1 RtcB family protein [Streptomyces anulatus] 20880.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear