| ID | SGR_4276 | Type | CDS |
| From | 5004409 | nt length | 1002 |
| To | 5005410 | aa length | 333 |
| Gene | hrdD | pI | 4.96 |
| Definition | RNA polymerase principal sigma factor hrdD | M.W (Da) | 37005 |
| Note | AseI frg. | D | |
| SignalP v.4.0 | Non-secretory protein | plot | Category |
| Bacteria* | Reciprocally best hit to | Score | E-value |
| avm | SAVERM_3694 putative RNA polymerase sigma factor | 503 | 1.0e-143 |
| coel | SCO3202 RNA polymerase principal sigma factor | 570 | 8.0e-164 |
| sam | SAM23877_3251 RNA polymerase principal sigma factor HrdD | 567 | 0.0e+00 |
| kan | CP970_25195 sigma-70 family RNA polymerase sigma factor | 569 | 0.0e+00 |
| scab | SCAB52911 putative RNA polymerase sigma factor | 588 | 3.0e-169 |
| Model | No. | Description | Position (aa) | Score | E-value | |
| Sigma70_r3 | 1 | Sigma-70 region 3 | 180-256 | 87.1 | 5.6e-25 | |
| Sigma70_r2 | 1 | Sigma-70 region 2 | 101-171 | 72.0 | 2.3e-20 | |
| Sigma70_r4 | 1 | Sigma-70, region 4 | 270-321 | 52.7 | 2e-14 | |
| Sigma70_r1_2 | 1 | Sigma-70 factor, region 1.2 | 34-67 | 42.5 | 4.4e-11 |
| ID | Description | Score | E-value |
| WP_003968470.1 | MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... | 1647 | 0.0e+00 |
| WP_069737147.1 | MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... | 1623 | 0.0e+00 |
| WP_219610473.1 | sigma-70 family RNA polymerase sigma factor [Streptomyces an... | 1621 | 0.0e+00 |
| WP_097911551.1 | sigma-70 family RNA polymerase sigma factor [Streptomyces sp... | 1619 | 0.0e+00 |
| WP_097964708.1 | sigma-70 family RNA polymerase sigma factor [Streptomyces sp... | 1619 | 0.0e+00 |
| WP_032792333.1 | MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... | 1619 | 0.0e+00 |
| WP_050358812.1 | MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... | 1619 | 0.0e+00 |
| WP_109178957.1 | sigma-70 family RNA polymerase sigma factor [Streptomyces sp... | 1619 | 0.0e+00 |
| WP_006125304.1 | MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... | 1617 | 0.0e+00 |
| WP_030710652.1 | MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... | 1617 | 0.0e+00 |
| Localization | Certainty | PSORT said |
| Not Clear |