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IDSGR_4321 TypeCDS
From5056753 nt length1176
To5057928 aa length391
GenecbiM pI6.03
Definitionputative membrane protein M.W (Da)39461
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3606 putative cobalt ABC transporter permease protein4053.0e-114
coelSCO3159 putative membrane protein.4702.0e-133
samSAM23877_3205 putative membrane protein4682.0e-166
kanCP970_25540 cobalt ABC transporter permease4511.0e-159
scabSCAB53361 putative cobalt ABC transporter permease protein4111.0e-115
saceSACE_3840 cobalamin (vitamin B12) biosynthesis CbiM protein1772.0e-45

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CbiM1Cobalt uptake substrate-specific transmembrane region2-208207.81.4e-61

PDGLE1PDGLE domain255-33347.98.6e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380518.1 MULTISPECIES: energy-coupling factor ABC transporter permeas... 13850.0e+00
WP_093562483.1 energy-coupling factor ABC transporter permease [Streptomyce... 13660.0e+00
WP_003968518.1 MULTISPECIES: energy-coupling factor ABC transporter permeas... 13600.0e+00
WP_164361352.1 energy-coupling factor ABC transporter permease [Streptomyce... 13500.0e+00
WP_215106675.1 PDGLE domain-containing protein [Streptomyces sp. McG3] >lcl... 12528.9e-170
WP_097966407.1 energy-coupling factor ABC transporter permease [Streptomyce... 12261.2e-165
WP_219610444.1 PDGLE domain-containing protein [Streptomyces anulatus] >gb 12225.5e-165
WP_214301128.1 PDGLE domain-containing protein [Streptomyces sp. Tu10] >lcl... 12188.3e-165
WP_098893626.1 energy-coupling factor ABC transporter permease [Streptomyce... 12191.3e-164
WP_190008967.1 energy-coupling factor ABC transporter permease [Streptomyce... 12181.7e-164

PSORT result

LocalizationCertaintyPSORT said
Not Clear