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IDSGR_4438 TypeCDS
From5189403 nt length705
To5190107 aa length234
Gene pI5.36
Definitionputative secreted protein M.W (Da)24076
Note AseI frg.C
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3534 putative secreted protein1971.0e-51
coelSCO3097 putative secreted protein2418.0e-65
samSAM23877_3147 Secreted protein2801.0e-96
kanCP970_25895 LysM peptidoglycan-binding domain-containing protein2161.0e-71
scabSCAB54431 putative secreted protein2271.0e-60

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Transglycosylas1Transglycosylase-like domain42-117115.21.4e-33

LysM1LysM domain187-23331.61.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380608.1 MULTISPECIES: transglycosylase family protein [Streptomyces]... 9927.3e-135
WP_164360483.1 transglycosylase family protein [Streptomyces griseus] >gb 9873.9e-134
WP_030705450.1 transglycosylase family protein [Streptomyces griseus] 9727.8e-132
WP_007456036.1 transglycosylase family protein [Streptomyces sp. W007] >gb 9728.2e-132
WP_050358944.1 transglycosylase family protein [Streptomyces europaeiscabie... 9682.5e-131
WP_210935037.1 MULTISPECIES: transglycosylase family protein [unclassified ... 9673.8e-131
WP_097912901.1 MULTISPECIES: transglycosylase family protein [unclassified ... 9674.1e-131
WP_097956491.1 MULTISPECIES: transglycosylase family protein [unclassified ... 9631.7e-130
WP_073871494.1 transglycosylase family protein [Streptomyces sp. CB00072] >... 9622.3e-130
WP_069754460.1 transglycosylase family protein [Streptomyces sp. EN16] 9605.5e-130

PSORT result

LocalizationCertaintyPSORT said
Not Clear