-- | --

IDSGR_4488 TypeCDS
From5249410 nt length1230
To5248181 aa length409
Gene pI9.22
Definitionputative transcriptional regulator M.W (Da)43698
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5028 putative transcriptional regulator5231.0e-149
coelSCO3048 putative membrane protein5178.0e-148
samSAM23877_3092 hypothetical protein5350.0e+00
kanCP970_26310 LytR family transcriptional regulator5300.0e+00
scabSCAB54951 5586.0e-160
saceSACE_3765 probable transcriptional regulator, LytR family2424.0e-65
nfarnfa1290 putative transcriptional regulator2192.0e-58

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LytR_cpsA_psr1Cell envelope-related transcriptional attenuator domain166-320145.51.2e-42

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_093562097.1 LCP family protein [Streptomyces sp. OspMP-M43] >emb 16350.0e+00
BAG21317.1 putative transcriptional regulator [Streptomyces griseus subsp. ... 16350.0e+00
WP_078562766.1 MULTISPECIES: LCP family protein [Streptomyces] >lcl 16350.0e+00
WP_003968713.1 MULTISPECIES: LCP family protein [unclassified Streptomyces]... 16340.0e+00
WP_078654477.1 LCP family protein [Streptomyces griseus] 16340.0e+00
WP_164363623.1 LCP family protein [Streptomyces griseus] >gb 16290.0e+00
WP_200719296.1 MULTISPECIES: LCP family protein [unclassified Streptomyces]... 16220.0e+00
WP_098895359.1 LCP family protein [Streptomyces sp. t99] 16190.0e+00
GGS12161.1 transcriptional regulator [Streptomyces rubiginosohelvolus] >dbj... 16180.0e+00
WP_097948614.1 LCP family protein [Streptomyces sp. ms115] 16180.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear