SGR_4529

ID SGR_4529 Type CDS
From 5308807 nt length 1188
To 5307620 aa length 395
Gene pI 8.59
Definition conserved hypothetical protein M.W (Da) 43721
Note AseI frg. C
SignalP v.4.0 Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*	Reciprocally best hit to	Score	E-value
avm	SAVERM_5069 hypothetical protein	577	1.0e-165
coel	SCO3007 hypothetical protein	629	0.0e+00
sam	SAM23877_3045 putative cytoplasmic protein	638	0.0e+00
kan	CP970_26630 winged helix-turn-helix domain-containing protein	601	0.0e+00
scab	SCAB55351	632	0.0e+00
sace	SACE_5905 protein of unknown function DUF1006	212	7.0e-56
nfar	nfa38710 hypothetical protein	174	1.0e-44

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

Model No. Description Position (aa) Score E-value

HTH_42 1 Winged helix DNA-binding domain 40-362 215.5 1.2e-63

BLAST search result (top 10 hits)

ID Description Score E-value
WP_012380670.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 1961 0.0e+00
WP_164364756.1 winged helix DNA-binding domain-containing protein [Streptom... 1957 0.0e+00
WP_030701548.1 winged helix DNA-binding domain-containing protein [Streptom... 1957 0.0e+00
WP_003968754.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 1954 0.0e+00
WP_215107834.1 winged helix DNA-binding domain-containing protein [Streptom... 1921 0.0e+00
WP_030594806.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 1918 0.0e+00
WP_210933389.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 1916 0.0e+00
WP_073741228.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 1915 0.0e+00
WP_050359603.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 1915 0.0e+00
WP_047176926.1 winged helix DNA-binding domain-containing protein [Streptom... 1911 0.0e+00

PSORT result

Localization Certainty PSORT said
Not Clear

ID	SGR_4529	Type	CDS
From	5308807	nt length	1188
To	5307620	aa length	395
Gene		pI	8.59
Definition	conserved hypothetical protein	M.W (Da)	43721
Note		AseI frg.	C
SignalP v.4.0	Non-secretory protein \| plot	Category

	Model	No.	Description	Position (aa)	Score	E-value
	HTH_42	1	Winged helix DNA-binding domain	40-362	215.5	1.2e-63