-- | --

IDSGR_4561 TypeCDS
From5359164 nt length489
To5359652 aa length162
GenesmpB pI10.52
Definitionputative small protein B M.W (Da)18651
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5107 putative small protein B2282.0e-61
coelSCO2966 smpB small protein B homologue2808.0e-77
samSAM23877_3001 SsrA-binding protein2677.0e-94
kanCP970_26860 SsrA-binding protein SmpB3012.0e-107
scabSCAB55751 putative small protein B2682.0e-73
saceSACE_1108 SsrA-binding protein2074.0e-55
nfarnfa44800 putative small protein B1975.0e-52

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SmpB1SmpB protein11-74102.77.3e-30

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030802453.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >gb 7936.2e-107
WP_003968790.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomycetaceae] ... 7927.6e-107
WP_124268464.1 SsrA-binding protein SmpB [Streptomyces sp. ADI96-02] >gb 7911.2e-106
WP_073800936.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >gb 7901.6e-106
WP_026241535.1 MULTISPECIES: SsrA-binding protein SmpB [unclassified Strept... 7901.6e-106
WP_030567837.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >lcl 7901.8e-106
WP_200720983.1 MULTISPECIES: SsrA-binding protein SmpB [unclassified Strept... 7901.8e-106
WP_097934728.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >gb 7883.2e-106
WP_030589153.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >gb 7883.2e-106
WP_030591899.1 SsrA-binding protein SmpB [Streptomyces globisporus] >gb 7883.3e-106

PSORT result

LocalizationCertaintyPSORT said
Not Clear