-- | --

IDSGR_4582 TypeCDS
From5386049 nt length282
To5386330 aa length93
Genehup pI9.84
Definitionputative DNA-binding protein Hu 1 M.W (Da)9660
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5127 putative DNA-binding protein Hu 11426.0e-36
coelSCO2950 hup DNA binding protein Hu (hs1)1759.0e-46
samSAM23877_2987 DNA-binding protein HU 11541.0e-51
kanCP970_26975 integration host factor1822.0e-62
scabSCAB55941 putative DNA-binding protein Hu 11782.0e-46

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Bac_DNA_binding1Bacterial DNA-binding protein1-9094.33.5e-27

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003968811.1 MULTISPECIES: HU family DNA-binding protein [Streptomycetace... 4698.2e-60
WP_017237029.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4681.5e-59
WP_105974351.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] 4662.8e-59
WP_202705253.1 HU family DNA-binding protein [Streptomyces fulvissimus] >gb... 4654.1e-59
WP_037692421.1 HU family DNA-binding protein [Streptomyces brevispora] >lcl... 4644.9e-59
WP_003954777.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4645.6e-59
MYV65410.1 integration host factor [Streptomyces sp. SID2131] 4636.7e-59
WP_019056394.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4636.8e-59
GGU25206.1 hypothetical protein GCM10010289_53330 [Streptomyces violascens]... 4677.0e-59
GGT90752.1 hypothetical protein GCM10010272_39410 [Streptomyces lateritius] 4679.0e-59

PSORT result

LocalizationCertaintyPSORT said
Not Clear