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IDSGR_4602 TypeCDS
From5411655 nt length645
To5412299 aa length214
GenesdrB pI6.98
Definitionputative IclR-family transcriptional regulator M.W (Da)22305
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5141 putative differentiation regulon (IclR-family transcriptional regulator)3131.0e-86
coelSCO2935 putative transcriptional regulator3613.0e-101
samSAM23877_2972 Transcriptional regulator3678.0e-132
kanCP970_27120 HTH domain-containing protein3626.0e-130
scabSCAB56321 putative differentiation regulon (IclR-family transcriptional regulator)3792.0e-106
saceSACE_0137 differentiation regulon (IclR-family transcriptional regulator)1962.0e-51
nfarnfa32430 putative transcriptional regulator1084.0e-25

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_IclR1IclR helix-turn-helix domain8-5855.14.3e-15

Rrf21Transcriptional regulator5-6025.11.5e-05

HTH_111HTH domain14-5024.02.4e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003968832.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7847.4e-104
NEB41718.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID1... 7769.3e-103
WP_205085117.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7761.1e-102
WP_030087587.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7761.3e-102
WP_018958460.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7751.9e-102
WP_096631029.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7724.1e-102
WP_030591826.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7724.5e-102
WP_030589260.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7725.1e-102
WP_007450583.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 7717.4e-102
WP_073215868.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 7717.5e-102

PSORT result

LocalizationCertaintyPSORT said
Not Clear