-- | --

IDSGR_4607 TypeCDS
From5416543 nt length966
To5415578 aa length321
GeneopuBC2 pI4.58
Definitionputative ABC transporter solute-binding protein M.W (Da)34702
Note AseI frg.C
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5144 putative ABC transporter substrate-binding protein4262.0e-120
coelSCO2933 putative permease binding-protein component4201.0e-118
samSAM23877_2970 Permease binding-protein component4203.0e-149
kanCP970_27140 glycine betaine ABC transporter substrate-binding protein4276.0e-152
saceSACE_0080 possible glycine betaine/carnitine/choline binding protein precursor2785.0e-76
nfarnfa32500 putative transporter permease2532.0e-68

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC1Substrate binding domain of ABC-type glycine betaine transport system45-312195.61e-57

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380728.1 glycine betaine ABC transporter substrate-binding protein [S... 15950.0e+00
WP_202549760.1 glycine betaine ABC transporter substrate-binding protein [S... 15940.0e+00
WP_219206224.1 glycine betaine ABC transporter substrate-binding protein [S... 15870.0e+00
MYR14591.1 glycine/betaine ABC transporter substrate-binding protein [Strept... 15860.0e+00
WP_202465381.1 MULTISPECIES: glycine betaine ABC transporter substrate-bind... 15850.0e+00
WP_003968837.1 MULTISPECIES: glycine betaine ABC transporter substrate-bind... 15850.0e+00
WP_202476653.1 glycine betaine ABC transporter substrate-binding protein [S... 15840.0e+00
WP_093564886.1 glycine betaine ABC transporter substrate-binding protein [S... 15820.0e+00
WP_093685680.1 glycine betaine ABC transporter substrate-binding protein [S... 15820.0e+00
WP_202463026.1 glycine betaine ABC transporter substrate-binding protein [S... 15800.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear