-- | --

IDSGR_4609 TypeCDS
From5418680 nt length1278
To5417403 aa length425
GeneopuBA2 pI5.62
Definitionputative ABC transporter ATP-binding protein M.W (Da)46685
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5146 putative ABC transporter ATP-binding protein6540.0e+00
coelSCO2931 putative ABC transporter ATP-binding protein7070.0e+00
samSAM23877_2968 Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA6970.0e+00
kanCP970_27150 ATP-binding cassette domain-containing protein7260.0e+00
saceSACE_0078 putative ABC transporter ATP-binding protein4623.0e-131
nfarnfa30810 putative ABC transporter ATP-binding protein4124.0e-116

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter44-189126.21.2e-36

CBS1CBS domain344-38631.41.7e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380730.1 betaine/proline/choline family ABC transporter ATP-binding p... 20990.0e+00
WP_003968839.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 20970.0e+00
WP_219610238.1 betaine/proline/choline family ABC transporter ATP-binding p... 20910.0e+00
WP_097962654.1 betaine/proline/choline family ABC transporter ATP-binding p... 20870.0e+00
WP_202463027.1 MULTISPECIES: betaine/proline/choline family ABC transporter... 20790.0e+00
WP_210933359.1 betaine/proline/choline family ABC transporter ATP-binding p... 20760.0e+00
WP_073821016.1 betaine/proline/choline family ABC transporter ATP-binding p... 20740.0e+00
WP_210991653.1 betaine/proline/choline family ABC transporter ATP-binding p... 20740.0e+00
WP_030591805.1 betaine/proline/choline family ABC transporter ATP-binding p... 20730.0e+00
WP_065487496.1 betaine/proline/choline family ABC transporter ATP-binding p... 20720.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear