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IDSGR_462 TypeCDS
From543549 nt length204
To543346 aa length67
Gene pI4.45
Definitionputative cold shock protein M.W (Da)7084
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0527 scoF cold shock protein1312.0e-32
samSAM23877_7010 cold shock protein-like protein1314.0e-43
scabSCAB87631 putative cold shock protein1304.0e-32

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-66105.58.2e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003964323.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3467.2e-42
EHM28679.1 putative cold shock protein [Streptomyces sp. W007] 3471.3e-41
WP_032791721.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3442.0e-41
WP_032765369.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3432.2e-41
WP_015613078.1 MULTISPECIES: cold-shock protein [Streptomycetaceae] >lcl 3423.7e-41
WP_214929999.1 cold shock domain-containing protein [Streptomyces sp. ISL-9... 3405.9e-41
WP_101391619.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3398.4e-41
WP_138051508.1 cold-shock protein [Streptomyces marianii] >lcl 3391.1e-40
WP_093898593.1 cold-shock protein [Streptomyces sp. Ncost-T10-10d] >emb 3381.3e-40
WP_030299749.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3381.6e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear