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IDSGR_4677 TypeCDS
From5494585 nt length447
To5494139 aa length148
Gene pI10.27
Definitionputative DNA mismatch endonuclease M.W (Da)16480
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_4024 DNA mismatch endonuclease vsr1079.0e-32
scabSCAB57142 1408.0e-35
saceSACE_1556 very short patch repair protein1439.0e-36
nfarnfa2330 putative DNA mismatch endonuclease1344.0e-33

*sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Vsr1DNA mismatch endonuclease Vsr14-7659.22.4e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
BAG21506.1 putative DNA mismatch endonuclease [Streptomyces griseus subsp. ... 7101.0e-94
WP_030701696.1 MULTISPECIES: very short patch repair endonuclease [Streptom... 7003.4e-93
WP_030740260.1 very short patch repair endonuclease [Streptomyces griseus] 6786.7e-90
WP_047176812.1 MULTISPECIES: very short patch repair endonuclease [Streptom... 6761.2e-89
WP_030345225.1 very short patch repair endonuclease [Streptomyces californi... 6752.2e-89
WP_030193296.1 very short patch repair endonuclease [Streptomyces californi... 6717.6e-89
KOG83013.1 DNA mismatch repair protein Vsr [Streptomyces griseus subsp. rhod... 6682.5e-88
WP_030728378.1 MULTISPECIES: very short patch repair endonuclease [Streptom... 6672.7e-88
WP_073741327.1 very short patch repair endonuclease [Streptomyces sp. CB021... 6641.0e-87
WP_057663091.1 very short patch repair endonuclease [Streptomyces anulatus]... 6612.4e-87

PSORT result

LocalizationCertaintyPSORT said
Not Clear