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IDSGR_4741 TypeCDS
From5572614 nt length606
To5572009 aa length201
GeneornA pI4.59
Definitionoligoribonuclease M.W (Da)22051
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5260 putative 3'->5' exoribonuclease3505.0e-98
coelSCO2793 ornA oligoribonuclease3613.0e-101
samSAM23877_2830 Oligoribonuclease3653.0e-131
kanCP970_27880 oligoribonuclease3651.0e-131
scabSCAB57821 putative 3'->5' exoribonuclease3644.0e-102
saceSACE_1292 oligoribonuclease (3'->5' exoribonuclease)2314.0e-62
nfarnfa12870 putative oligoribonuclease2407.0e-65

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNase_T1Exonuclease6-16885.45.5e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003968986.1 MULTISPECIES: oligoribonuclease [Streptomyces] >sp 10533.0e-145
WP_030701760.1 oligoribonuclease [Streptomyces griseus] 10481.4e-144
WP_047180696.1 MULTISPECIES: oligoribonuclease [Streptomyces] >gb 10481.4e-144
WP_164218784.1 oligoribonuclease [Streptomyces anulatus] >gb 10462.8e-144
WP_164611679.1 oligoribonuclease [Streptomyces sp. SID14515] >gb 10453.6e-144
WP_069754059.1 MULTISPECIES: oligoribonuclease [unclassified Streptomyces] ... 10453.8e-144
WP_215101746.1 oligoribonuclease [Streptomyces sp. McG3] >lcl 10438.8e-144
WP_056707634.1 MULTISPECIES: oligoribonuclease [unclassified Streptomyces] ... 10421.2e-143
WP_032792012.1 MULTISPECIES: oligoribonuclease [unclassified Streptomyces] ... 10402.5e-143
WP_057668238.1 oligoribonuclease [Streptomyces anulatus] >gb 10393.5e-143

PSORT result

LocalizationCertaintyPSORT said
Not Clear