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IDSGR_4742 TypeCDS
From5573842 nt length1218
To5572625 aa length405
GeneadpA pI9.12
Definitiontranscriptional regulator M.W (Da)43069
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5261 putative AraC-family transcriptional regulator5686.0e-163
coelSCO2792 adpA araC-family transcriptional regulator6320.0e+00
samSAM23877_2828 AdpA6270.0e+00
kanCP970_27885 helix-turn-helix domain-containing protein6540.0e+00
scabSCAB57831 putative AraC-family transcriptional regulator6340.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain253-33169.81.6e-19

HTH_AraC2Bacterial regulatory helix-turn-helix proteins, AraC family242-280, 293-33056.22.2e-15

DJ-1_PfpI1DJ-1/PfpI family25-19154.69.5e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003968987.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 19400.0e+00
WP_097870628.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19350.0e+00
WP_219566074.1 helix-turn-helix domain-containing protein [Streptomyces gri... 19320.0e+00
WP_018959415.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19320.0e+00
WP_103507821.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19090.0e+00
WP_137232875.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 19080.0e+00
WP_103534875.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19070.0e+00
WP_010062831.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 19070.0e+00
WP_217228295.1 helix-turn-helix domain-containing protein [Streptomyces anu... 19070.0e+00
WP_098023848.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19060.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear