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IDSGR_4771 TypeCDS
From5607960 nt length420
To5608379 aa length139
Gene pI10.49
Definitionputative AraC-family transcriptional regulator M.W (Da)15507
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3000 putative AraC-family transcriptional regulator1891.0e-49
coelSCO6518 putative transcriptional regulator2282.0e-61
samSAM23877_6224 Transcriptional regulator2024.0e-69
kanCP970_23445 AraC family transcriptional regulator2021.0e-68
scabSCAB29991 putative AraC-family transcriptional regulator2105.0e-56
saceSACE_3703 transcriptional regulator, AraC family1897.0e-50
nfarnfa43930 putative transcriptional regulator1881.0e-49

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain29-10882.61.6e-23

HTH_AraC2Bacterial regulatory helix-turn-helix proteins, AraC family20-56, 71-10660.21.2e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202465071.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 6011.0e-78
WP_003969016.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 6031.1e-78
WP_097867123.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6003.0e-78
WP_202463053.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5974.5e-78
WP_030701774.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 5985.4e-78
WP_215101803.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5951.5e-77
KUJ70384.1 AraC family transcriptional regulator [Streptomyces albus subsp. ... 5908.6e-77
WP_203608416.1 helix-turn-helix transcriptional regulator [Streptomyces anu... 5862.2e-76
WP_203685558.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5862.3e-76
NEE11210.1 helix-turn-helix transcriptional regulator [Streptomyces sp. SID7... 5872.3e-76

PSORT result

LocalizationCertaintyPSORT said
Not Clear