-- | --

IDSGR_478 TypeCDS
From559852 nt length843
To559010 aa length280
Gene pI8.41
Definitionhypothetical protein M.W (Da)28438
Note AseI frg.F
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4862 hypothetical protein1755.0e-45
coelSCO4582 hypothetical protein2002.0e-52
samSAM23877_4416 Phage tail length tape-measure protein2091.0e-69
scabSCAB37841 putative secreted protein2563.0e-69
saceSACE_7166 hypothetical protein1126.0e-26
nfarnfa12690 hypothetical protein1749.0e-45

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SLT1Transglycosylase SLT domain205-27635.55.9e-09

LysM1LysM domain72-11825.11.3e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012377823.1 MULTISPECIES: LysM peptidoglycan-binding domain-containing p... 9211.1e-122
WP_164361435.1 LysM peptidoglycan-binding domain-containing protein [Strept... 9183.9e-122
WP_161186020.1 LysM peptidoglycan-binding domain-containing protein [Strept... 9114.4e-121
WP_030702026.1 LysM peptidoglycan-binding domain-containing protein [Strept... 9071.8e-120
WP_003964342.1 MULTISPECIES: transglycosylase SLT domain-containing protein... 9053.1e-120
WP_093683314.1 MULTISPECIES: LysM peptidoglycan-binding domain-containing p... 9044.4e-120
WP_097956481.1 LysM peptidoglycan-binding domain-containing protein [Strept... 8741.9e-115
WP_215103248.1 transglycosylase SLT domain-containing protein [Streptomyces... 8732.6e-115
WP_097916337.1 LysM peptidoglycan-binding domain-containing protein [Strept... 8732.7e-115
WP_007455689.1 LysM peptidoglycan-binding domain-containing protein [Strept... 8723.4e-115

PSORT result

LocalizationCertaintyPSORT said
Not Clear