-- | --

IDSGR_4825 TypeCDS
From5672886 nt length2226
To5675111 aa length741
GenerecD pI6.53
Definitionputative exodeoxyribonuclease V M.W (Da)79878
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5329 putative exodeoxyribonuclease V12640.0e+00
coelSCO2737 putative deoxyribonuclease.13200.0e+00
samSAM23877_2766 Deoxyribonuclease13160.0e+00
kanCP970_28095 ATP-dependent RecD-like DNA helicase13340.0e+00
scabSCAB58781 putative exodeoxyribonuclease V13130.0e+00
saceSACE_3353 helicase RecD/TraA11100.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_301AAA domain335-514154.22.9e-45

HHH_41Helix-hairpin-helix containing domain144-234122.06.7e-36

AAA_191AAA domain340-469116.11.4e-33

UvrD_C_21UvrD-like helicase C-terminal domain658-70673.11e-20

Viral_helicase11Viral (Superfamily 1) RNA helicase656-70640.22.9e-10

HHH_51Helix-hairpin-helix domain94-14234.81.7e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003969076.1 MULTISPECIES: ATP-dependent RecD-like DNA helicase [Streptom... 35490.0e+00
WP_093685767.1 MULTISPECIES: ATP-dependent RecD-like DNA helicase [unclassi... 35450.0e+00
WP_219206291.1 ATP-dependent RecD-like DNA helicase [Streptomyces griseus] ... 35410.0e+00
WP_215108301.1 ATP-dependent RecD-like DNA helicase [Streptomyces sp. McG3]... 35190.0e+00
WP_097868934.1 ATP-dependent RecD-like DNA helicase [Streptomyces sp. rh34] 34770.0e+00
WP_073801204.1 MULTISPECIES: ATP-dependent RecD-like DNA helicase [unclassi... 34760.0e+00
WP_175516228.1 ATP-dependent RecD-like DNA helicase [Streptomyces sp. CAI 1... 34760.0e+00
WP_175467100.1 MULTISPECIES: ATP-dependent RecD-like DNA helicase [unclassi... 34730.0e+00
WP_069757000.1 MULTISPECIES: ATP-dependent RecD-like DNA helicase [unclassi... 34720.0e+00
WP_097963846.1 ATP-dependent RecD-like DNA helicase [Streptomyces sp. or20] 34700.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear