-- | --

IDSGR_4853 TypeCDS
From5711375 nt length1644
To5713018 aa length547
Gene pI5.12
Definitionputative ABC transporter ATP-binding protein M.W (Da)60629
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5367 putative ABC transporter ATP-binding protein10230.0e+00
coelSCO2677 putative ABC transpoter ATP-binding protein9970.0e+00
samSAM23877_2721 fused putative transporter subunit of ABC superfamily: ATP-binding components10270.0e+00
kanCP970_28475 energy-dependent translational throttle protein EttA10800.0e+00
scabSCAB59311 putative ABC transporter ATP-binding protein9940.0e+00
saceSACE_1323 ABC-transporter protein, ATP binding component8850.0e+00
nfarnfa13050 putative ABC transporter ATP-binding protein8970.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran2ABC transporter14-181, 331-464172.94.3e-51

ABC_tran_Xtn1ABC transporter220-28952.04.7e-14

DLIC1Dynein light intermediate chain (DLIC)336-37021.29.7e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
BAG21682.1 putative ABC transporter ATP-binding protein [Streptomyces grise... 26380.0e+00
WP_003969104.1 MULTISPECIES: energy-dependent translational throttle protei... 26350.0e+00
WP_137232989.1 MULTISPECIES: energy-dependent translational throttle protei... 26300.0e+00
OKJ13278.1 ABC transporter ATP-binding protein [Streptomyces sp. TSRI0261] 26300.0e+00
OKJ39664.1 ABC transporter ATP-binding protein [Streptomyces sp. CB02366] >l... 26290.0e+00
WP_073766146.1 energy-dependent translational throttle protein EttA [Strept... 26290.0e+00
WP_073801262.1 MULTISPECIES: energy-dependent translational throttle protei... 26280.0e+00
WP_075347761.1 MULTISPECIES: energy-dependent translational throttle protei... 26270.0e+00
WP_078950920.1 energy-dependent translational throttle protein EttA [Strept... 26260.0e+00
WP_078580975.1 MULTISPECIES: energy-dependent translational throttle protei... 26250.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear