| ID | SGR_4876
| Type | CDS
|
| From | 5744532
| nt length | 537
|
| To | 5745068
| aa length | 178
|
| Gene |
| pI | 10.99
|
| Definition | putative endonuclease
| M.W (Da) | 19629
|
| Note |
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_5386 putative endonuclease | 326 | 8.0e-91
|
| coel | SCO2655 hypothetical protein | 339 | 1.0e-94
|
| sam | SAM23877_2705 hypothetical protein | 335 | 3.0e-120
|
| kan | CP970_28630 HNH endonuclease | 341 | 1.0e-122
|
| scab | SCAB59511 putative endonuclease | 333 | 1.0e-92
|
| sace | SACE_1334 HNH endonuclease | 181 | 3.0e-47
|
| nfar | nfa13130 putative endonuclease | 163 | 8.0e-42
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| HNH_5 | 1 | HNH endonuclease | 83-129 | 53.1 | 1.9e-14
|
| HNH | 1 | HNH endonuclease | 83-123 | 43.4 | 2.5e-11
|
| HNH_4 | 1 | HNH endonuclease | 91-124 | 31.3 | 1.3e-07
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|