| ID | SGR_4906
| Type | CDS
|
| From | 5780463
| nt length | 642
|
| To | 5779822
| aa length | 213
|
| Gene | sodF
| pI | 5.03
|
| Definition | Fe-Zn-superoxide dismutase
| M.W (Da) | 23379
|
| Note |
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_5413 putative superoxide dismutase | 379 | 1.0e-106
|
| coel | SCO2633 sodF superoxide dismutase [Fe-Zn] | 396 | 1.0e-111
|
| sam | SAM23877_2681 Superoxide dismutase [Fe-Zn] 1 | 396 | 2.0e-143
|
| kan | CP970_28770 superoxide dismutase | 406 | 3.0e-147
|
| scab | SCAB59731 putative superoxide dismutase | 392 | 2.0e-110
|
| sace | SACE_0619 superoxide dismutase [Fe-Zn] 1 (FeSOD I) | 238 | 3.0e-64
|
| nfar | nfa1210 putative superoxide dismutase | 226 | 1.0e-60
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Sod_Fe_C | 1 | Iron/manganese superoxide dismutases, C-terminal domain | 98-198 | 112.1 | 1.1e-32
|
| Sod_Fe_N | 1 | Iron/manganese superoxide dismutases, alpha-hairpin domain | 3-83 | 103.1 | 7.5e-30
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|