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IDSGR_4970 TypeCDS
From5864196 nt length432
To5864627 aa length143
Gene pI4.43
Definitionconserved hypothetical protein M.W (Da)15933
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5480 hypothetical protein2068.0e-55
coelSCO2577 hypothetical protein2406.0e-65
samSAM23877_2627 Ribosomal silencing factor RsfS2364.0e-82
kanCP970_29085 ribosome silencing factor2341.0e-81
scabSCAB60301 hypothetical protein2338.0e-63
saceSACE_1432 hypothetical protein1145.0e-27
nfarnfa13770 hypothetical protein1491.0e-37

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RsfS1Ribosomal silencing factor during starvation14-10976.51.5e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381002.1 MULTISPECIES: ribosome silencing factor [Streptomyces] >gb 6968.3e-93
WP_006124372.1 MULTISPECIES: ribosome silencing factor [Streptomyces] >lcl 6941.8e-92
WP_010062919.1 MULTISPECIES: ribosome silencing factor [Streptomyces] >gb 6923.6e-92
WP_099172529.1 MULTISPECIES: ribosome silencing factor [unclassified Strept... 6906.2e-92
WP_047176560.1 MULTISPECIES: ribosome silencing factor [unclassified Strept... 6906.3e-92
WP_003969221.1 MULTISPECIES: ribosome silencing factor [Streptomyces] >gb 6917.0e-92
WP_124268201.1 ribosome silencing factor [Streptomyces sp. ADI96-02] >gb 6898.9e-92
WP_124265805.1 ribosome silencing factor [Streptomyces sp. ADI98-10] 6899.9e-92
WP_030585387.1 ribosome silencing factor [Streptomyces anulatus] 6891.0e-91
WP_097893379.1 ribosome silencing factor [Streptomyces sp. st170] 6891.2e-91

PSORT result

LocalizationCertaintyPSORT said
Not Clear