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IDSGR_4976 TypeCDS
From5871837 nt length999
To5872835 aa length332
GenecomEA pI11.5
Definitionputative DNA-binding protein M.W (Da)33378
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5491 putative exogenous DNA-binding protein2003.0e-52
coelSCO2568 putative DNA-binding protein.2525.0e-68
samSAM23877_2615 putative DNA-binding protein1972.0e-61
kanCP970_29160 ComEA family DNA-binding protein1924.0e-59
scabSCAB60391 putative exogenous DNA-binding protein2111.0e-55
saceSACE_1435 competence protein ComEA helix-hairpin-helix region1271.0e-30
nfarnfa13820 putative DNA-binding protein972.0e-21

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HHH_31Helix-hairpin-helix motif272-33169.02.7e-19

SLBB1SLBB domain187-24038.37.9e-10

HHH1Helix-hairpin-helix motif273-29534.21.2e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
BAG21805.1 putative DNA-binding protein [Streptomyces griseus subsp. griseu... 8824.9e-115
SCE62951.1 competence protein ComEA, partial [Streptomyces sp. OspMP-M43] 8682.0e-113
SEE61822.1 competence protein ComEA [Streptomyces griseus] >emb 8573.5e-112
EGE44595.1 Soluble ligand binding domain protein [Streptomyces sp. ACT-1] 8471.7e-110
SBV07878.1 competence protein ComEA [Streptomyces sp. MnatMP-M77] 8401.2e-109
WP_042497212.1 MULTISPECIES: ComEA family DNA-binding protein [Streptomyces... 7282.3e-93
WP_161186529.1 MULTISPECIES: ComEA family DNA-binding protein [Streptomyces... 7282.3e-93
WP_030700662.1 ComEA family DNA-binding protein [Streptomyces griseus] 7258.0e-93
WP_043392262.1 MULTISPECIES: ComEA family DNA-binding protein [unclassified... 7204.0e-92
WP_093685449.1 MULTISPECIES: ComEA family DNA-binding protein [unclassified... 7189.0e-92

PSORT result

LocalizationCertaintyPSORT said
Not Clear