| ID | SGR_5014
| Type | CDS
|
| From | 5916438
| nt length | 747
|
| To | 5917184
| aa length | 248
|
| Gene | recO
| pI | 8.38
|
| Definition | putative DNA recombination and repair protein RecO
| M.W (Da) | 26665
|
| Note |
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_5628 putative DNA recombination and repair protein | 459 | 2.0e-130
|
| coel | SCO2510 putative DNA recombination and repair protein | 461 | 5.0e-131
|
| sam | SAM23877_2560 DNA repair protein RecO | 450 | 2.0e-163
|
| kan | CP970_29505 DNA repair protein RecO | 442 | 2.0e-160
|
| scab | SCAB61921 putative DNA recombination and repair protein | 452 | 2.0e-128
|
| sace | SACE_1492 DNA repair protein RecO | 276 | 2.0e-75
|
| nfar | nfa14520 putative DNA repair protein | 246 | 1.0e-66
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| RecO_C | 1 | Recombination protein O C terminal | 92-244 | 115.8 | 1.3e-33
|
| RecO_N | 1 | Recombination protein O N terminal | 1-85 | 100.3 | 4e-29
|
| RecO_N_2 | 1 | RecO N terminal | 8-66 | 36.4 | 2.8e-09
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|