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IDSGR_5030 TypeCDS
From5928738 nt length867
To5927872 aa length288
Gene pI6.53
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)30863
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_7085 putative RNA polymerase ECF-subfamily sigma factor1705.0e-52
saceSACE_1934 putative RNA polymerase sigma factor1662.0e-42

*sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 29-7452.72.4e-14

Sigma70_r4_21Sigma-70, region 4103-15545.53.9e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381034.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 12121.3e-166
WP_161183886.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 12076.4e-166
WP_030700683.1 sigma-70 family RNA polymerase sigma factor [Streptomyces gr... 11902.8e-163
WP_003969296.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 11651.7e-159
WP_093685434.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 11616.1e-159
WP_087766566.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 10992.2e-149
WP_047176514.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 10912.8e-148
WP_057662596.1 sigma-70 family RNA polymerase sigma factor [Streptomyces an... 10774.5e-146
WP_050360064.1 sigma-70 family RNA polymerase sigma factor [Streptomyces eu... 10731.4e-145
WP_164218453.1 sigma-70 family RNA polymerase sigma factor [Streptomyces an... 10713.1e-145

PSORT result

LocalizationCertaintyPSORT said
Not Clear