| ID | SGR_5066
| Type | CDS
|
| From | 5963042
| nt length | 1932
|
| To | 5964973
| aa length | 643
|
| Gene | dnaG
| pI | 6.47
|
| Definition | putative DNA primase
| M.W (Da) | 69421
|
| Note |
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_5676 putative DNA primase | 944 | 0.0e+00
|
| coel | SCO2468 DNA primase | 999 | 0.0e+00
|
| sam | SAM23877_2521 DNA primase | 969 | 0.0e+00
|
| kan | CP970_29860 DNA primase | 1060 | 0.0e+00
|
| scab | SCAB62491 putative DNA primase | 975 | 0.0e+00
|
| sace | SACE_1506 DNA primase (bacterial type) | 582 | 5.0e-167
|
| nfar | nfa14700 putative DNA primase | 540 | 1.0e-154
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Toprim_N | 1 | DNA primase catalytic core, N-terminal domain | 127-253 | 127.9 | 2.1e-37
|
| zf-CHC2 | 1 | CHC2 zinc finger | 7-101 | 109.8 | 3.9e-32
|
| Toprim_4 | 1 | Toprim domain | 262-332 | 63.4 | 2e-17
|
| DnaB_bind | 1 | DnaB-helicase binding domain of primase | 373-427 | 48.1 | 9.1e-13
|
| DnaG_DnaB_bind | 1 | DNA primase DnaG DnaB-binding | 494-609 | 45.7 | 7.8e-12
|
| Toprim_2 | 1 | Toprim-like | 264-352 | 43.5 | 3e-11
|
| Toprim | 1 | Toprim domain | 263-330 | 27.8 | 2e-06
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|