ID	SGR_5067	Type	CDS
From	5965183	nt length	1092
To	5966274	aa length	363
Gene	hrdA	pI	6.14
Definition	putative RNA polymerase principal sigma factor	M.W (Da)	40464
Note		AseI frg.	C
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r3	1	Sigma-70 region 3	209-285	89.2	1.3e-25
	Sigma70_r2	1	Sigma-70 region 2	130-199	82.7	1e-23
	Sigma70_r4	1	Sigma-70, region 4	298-351	71.7	2.3e-20
	Sigma70_r1_2	1	Sigma-70 factor, region 1.2	65-98	59.9	1.6e-16

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_093685420.1	RNA polymerase sigma factor [Streptomyces sp. MnatMP-M77] >g...	1663	0.0e+00
WP_003969331.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb...	1661	0.0e+00
WP_202463814.1	RNA polymerase sigma factor [Streptomyces sp. SID8364]	1657	0.0e+00
WP_202464941.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces]	1656	0.0e+00
WP_097910749.1	RNA polymerase sigma factor [Streptomyces sp. b84]	1625	0.0e+00
WP_073867860.1	RNA polymerase sigma factor [Streptomyces sp. CB00072] >gb	1620	0.0e+00
WP_030078059.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb...	1618	0.0e+00
WP_103510209.1	RNA polymerase sigma factor [Streptomyces sp. SM13]	1617	0.0e+00
WP_097921886.1	RNA polymerase sigma factor [Streptomyces sp. wa1063]	1617	0.0e+00
WP_007449474.1	MULTISPECIES: RNA polymerase sigma factor [unclassified Stre...	1616	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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