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IDSGR_5068 TypeCDS
From5968222 nt length1929
To5966294 aa length642
Gene pI4.94
Definitionputative ABC transporter ATPase and permease component M.W (Da)69097
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5680 putative ABC transporter ATP-binding protein9760.0e+00
coelSCO2464 putative ABC transporter10440.0e+00
samSAM23877_2517 conserved membrane protein of unknown function10260.0e+00
kanCP970_29870 ABC transporter ATP-binding protein10330.0e+00
scabSCAB62511 putative ABC transporter ATP-binding protein10460.0e+00
nfarnfa2640 putative ABC transporter7480.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region46-351187.63.1e-55

ABC_tran1ABC transporter414-563108.23.9e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381061.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27180.0e+00
WP_093564479.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 27160.0e+00
WP_161184811.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 27130.0e+00
WP_093685419.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27120.0e+00
WP_003969332.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27100.0e+00
WP_164363188.1 ABC transporter ATP-binding protein/permease [Streptomyces g... 27080.0e+00
WP_073867859.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 26930.0e+00
WP_097921885.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 26900.0e+00
WP_007449473.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 26870.0e+00
WP_215105131.1 ATP-binding cassette domain-containing protein [Streptomyces... 26780.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear