SGR_5109

ID SGR_5109 Type CDS
From 6021916 nt length 1200
To 6020717 aa length 399
Gene pI 4.96
Definition conserved hypothetical protein M.W (Da) 42460
Note AseI frg. N
SignalP v.4.0 Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*	Reciprocally best hit to	Score	E-value
avm	SAVERM_5789 hypothetical protein	625	2.0e-180
coel	SCO2386 hypothetical protein	696	0.0e+00
sam	SAM23877_2456 hypothetical protein	697	0.0e+00
kan	CP970_30165 PucR family transcriptional regulator	679	0.0e+00
scab	SCAB64171 hypothetical protein	699	0.0e+00
sace	SACE_1527 regulator of polyketide synthase expression-like	300	2.0e-82
nfar	nfa16140 hypothetical protein	262	4.0e-71

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

Model No. Description Position (aa) Score E-value

HTH_30 1 PucR C-terminal helix-turn-helix domain 331-388 70.5 6.9e-20

BLAST search result (top 10 hits)

ID Description Score E-value
WP_030118293.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 1614 0.0e+00
WP_098010337.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 1611 0.0e+00
WP_003969379.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 1611 0.0e+00
WP_215110110.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 1610 0.0e+00
WP_096623153.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 1609 0.0e+00
WP_150195251.1 helix-turn-helix domain-containing protein [Streptomyces par... 1608 0.0e+00
WP_030708039.1 helix-turn-helix domain-containing protein [Streptomyces gri... 1608 0.0e+00
WP_073765768.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 1607 0.0e+00
WP_073218664.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 1607 0.0e+00
WP_030801361.1 helix-turn-helix domain-containing protein [Streptomyces med... 1606 0.0e+00

PSORT result

Localization Certainty PSORT said
Not Clear

ID	SGR_5109	Type	CDS
From	6021916	nt length	1200
To	6020717	aa length	399
Gene		pI	4.96
Definition	conserved hypothetical protein	M.W (Da)	42460
Note		AseI frg.	N
SignalP v.4.0	Non-secretory protein \| plot	Category

	Model	No.	Description	Position (aa)	Score	E-value
	HTH_30	1	PucR C-terminal helix-turn-helix domain	331-388	70.5	6.9e-20