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IDSGR_5226 TypeCDS
From6149480 nt length480
To6149001 aa length159
Gene pI10.98
Definitionconserved hypothetical protein M.W (Da)16789
Note AseI frg.H
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2564 putative secreted protein1213.0e-29
kanCP970_31025 lamin tail domain-containing protein2043.0e-69
scabSCAB25491 putative secreted protein1283.0e-31

*avm, Streptomyces avermitilis; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LTD1Lamin Tail Domain32-14674.85.9e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003969495.1 MULTISPECIES: lamin tail domain-containing protein [Streptom... 5852.4e-75
WP_093562723.1 lamin tail domain-containing protein [Streptomyces sp. OspMP... 5835.6e-75
WP_097872243.1 lamin tail domain-containing protein [Streptomyces sp. rh34] 5741.2e-73
WP_215109890.1 lamin tail domain-containing protein [Streptomyces sp. McG3]... 5697.1e-73
WP_030080941.1 MULTISPECIES: lamin tail domain-containing protein [Streptom... 5671.1e-72
WP_073867730.1 MULTISPECIES: lamin tail domain-containing protein [unclassi... 5671.2e-72
WP_219609702.1 lamin tail domain-containing protein [Streptomyces anulatus]... 5671.5e-72
WP_069756028.1 MULTISPECIES: lamin tail domain-containing protein [unclassi... 5644.2e-72
WP_097965659.1 lamin tail domain-containing protein [Streptomyces sp. or20] 5634.9e-72
WP_217225261.1 lamin tail domain-containing protein [Streptomyces anulatus] 5634.9e-72

PSORT result

LocalizationCertaintyPSORT said
Not Clear