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IDSGR_5250 TypeCDS
From6174165 nt length3483
To6177647 aa length1160
Gene pI5.04
Definitionputative AfsR-like transcriptional regulator M.W (Da)123948
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5939 putative multi-domain regulatory protein11180.0e+00
coelSCO2259 putative multi-domain regulatory protein.9240.0e+00
samSAM23877_2338 hypothetical protein11650.0e+00
kanCP970_31190 AfsR/SARP family transcriptional regulator12130.0e+00
scabSCAB66351 putative multi-domain regulatory protein12160.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BTAD1Bacterial transcriptional activator domain113-255128.23e-37

Trans_reg_C1Transcriptional regulatory protein, C terminal43-10529.74.5e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202549815.1 winged helix-turn-helix domain-containing protein [Streptomy... 46250.0e+00
WP_012381194.1 winged helix-turn-helix domain-containing protein [Streptomy... 46220.0e+00
WP_202463506.1 winged helix-turn-helix domain-containing protein [Streptomy... 46220.0e+00
WP_093685001.1 winged helix-turn-helix domain-containing protein [Streptomy... 46210.0e+00
WP_078654396.1 winged helix-turn-helix domain-containing protein [Streptomy... 46170.0e+00
WP_003969522.1 winged helix-turn-helix domain-containing protein [Streptomy... 46110.0e+00
WP_202476720.1 winged helix-turn-helix domain-containing protein [Streptomy... 46040.0e+00
WP_079192025.1 winged helix-turn-helix domain-containing protein [Streptomy... 44170.0e+00
OKI57588.1 AfsR family transcriptional regulator [Streptomyces sp. CB00072] 43200.0e+00
WP_217228717.1 winged helix-turn-helix domain-containing protein [Streptomy... 40370.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear