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IDSGR_5251 TypeCDS
From6178575 nt length861
To6177715 aa length286
Gene pI10.35
Definitionputative ABC transporter permease protein M.W (Da)30160
Note AseI frg.H
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5940 putative ABC transporter permease protein3262.0e-90
coelSCO2258 probable ABC-transporter transmembrane component.3301.0e-91
samSAM23877_2337 ABC transporter transmembrane protein3182.0e-110
kanCP970_31195 ABC transporter permease3507.0e-123
scabSCAB66361 putative ABC transporter permease protein3572.0e-99
saceSACE_4276 ABC transporter, permease component2123.0e-56

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter37-251114.15.3e-33

ABC2_membrane_31ABC-2 family transporter protein86-27862.53.4e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381195.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 13490.0e+00
WP_003969523.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 13480.0e+00
WP_093564038.1 ABC transporter permease [Streptomyces sp. OspMP-M43] >emb 13410.0e+00
WP_050357937.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 13270.0e+00
WP_030080888.1 ABC transporter permease [Streptomyces baarnensis] 12841.2e-177
WP_073801752.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12831.7e-177
WP_107411171.1 ABC transporter permease [Streptomyces sp. CS149] >gb 12771.2e-176
WP_109977459.1 ABC transporter permease [Streptomyces sp. CS090A] >gb 12771.3e-176
WP_093806201.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 12753.2e-176
WP_175464639.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12753.3e-176

PSORT result

LocalizationCertaintyPSORT said
Not Clear