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IDSGR_5316 TypeCDS
From6258422 nt length468
To6258889 aa length155
Gene pI10.41
Definitionputative membrane protein M.W (Da)16423
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6006 putative membrane protein1968.0e-52
coelSCO2197 putative integral membrane protein2092.0e-55
samSAM23877_2292 Integral membrane protein2094.0e-71
kanCP970_31580 RDD family protein2381.0e-82
scabSCAB66891 putative membrane protein2083.0e-55
nfarnfa16680 hypothetical protein1021.0e-23

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RDD1RDD family42-14852.26.6e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EGE44940.1 RDD domain containing protein [Streptomyces sp. ACT-1] >lcl 6423.4e-84
MYT78563.1 RDD family protein [Streptomyces sp. SID8364] 6415.7e-84
NDZ59956.1 RDD family protein [Streptomyces anulatus] >gb 6337.8e-83
RPK86039.1 RDD family protein [Streptomyces sp. ADI98-10] 6276.6e-82
6276.9e-82
GGP41783.1 RDD family protein [Streptomyces sindenensis] 6268.5e-82
EFE73967.1 integral membrane protein [Streptomyces filamentosus NRRL 15998] ... 6268.8e-82
GGS20571.1 RDD family protein [Streptomyces parvus] >emb 6261.0e-81
GGY21204.1 RDD family protein [Streptomyces anulatus] 6251.3e-81
EHM29158.1 hypothetical protein SPW_2451 [Streptomyces sp. W007] 6251.3e-81

PSORT result

LocalizationCertaintyPSORT said
Not Clear