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IDSGR_5345 TypeCDS
From6290042 nt length3156
To6293197 aa length1051
Gene pI4.51
Definitionputative integral membrane efflux protein M.W (Da)108507
Note AseI frg.H
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6040 putative cation/multidrug efflux protein13270.0e+00
coelSCO2164 putative integral membrane efflux protein15200.0e+00
samSAM23877_2259 Integral membrane efflux protein15210.0e+00
kanCP970_31830 efflux RND transporter permease subunit15590.0e+00
scabSCAB67221 putative cation/multidrug efflux protein15490.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ACR_tran1AcrB/AcrD/AcrF family5-1013722.28.2e-217

MMPL2MMPL family295-499, 789-102052.72.8e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381260.1 MULTISPECIES: efflux RND transporter permease subunit [Strep... 42460.0e+00
WP_161184030.1 efflux RND transporter permease subunit [Streptomyces sp. SI... 42450.0e+00
WP_030700901.1 efflux RND transporter permease subunit [Streptomyces griseu... 42410.0e+00
WP_164361061.1 efflux RND transporter permease subunit [Streptomyces griseu... 42380.0e+00
WP_093563249.1 efflux RND transporter permease subunit, partial [Streptomyc... 42360.0e+00
WP_003969622.1 MULTISPECIES: efflux RND transporter permease subunit [uncla... 42330.0e+00
WP_219206461.1 efflux RND transporter permease subunit [Streptomyces griseu... 42300.0e+00
WP_093684959.1 MULTISPECIES: efflux RND transporter permease subunit [uncla... 42300.0e+00
WP_215102934.1 efflux RND transporter permease subunit [Streptomyces sp. Mc... 41240.0e+00
WP_097911046.1 efflux RND transporter permease subunit [Streptomyces sp. b8... 41040.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear