| ID | SGR_5358
| Type | CDS
|
| From | 6305748
| nt length | 810
|
| To | 6306557
| aa length | 269
|
| Gene | qcrC
| pI | 6.35
|
| Definition | putative cytochrome c heme-binding subunit
| M.W (Da) | 27361
|
| Note |
| AseI frg. | H
|
| SignalP v.4.0 | Signal peptide | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_6053 putative cytochrome c heme-binding subunit | 385 | 3.0e-108
|
| coel | SCO2150 cytochrome c heme-binding subunit | 437 | 6.0e-124
|
| sam | SAM23877_2246 Menaquinol-cytochrome c reductase cytochrome c subunit | 388 | 2.0e-138
|
| kan | CP970_31905 cystathionine beta-lyase | 431 | 5.0e-155
|
| scab | SCAB67351 putative cytochrome c heme-binding subunit | 455 | 2.0e-129
|
| sace | SACE_1685 cytochrome c mono-and diheme variants | 222 | 3.0e-59
|
| nfar | nfa17270 putative cytochrome c component | 204 | 5.0e-54
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Cytochrome_CBB3 | 2 | Cytochrome C oxidase, cbb3-type, subunit III | 48-122, 142-216 | 82.6 | 1.6e-23
|
| Cytochrom_C | 2 | Cytochrome c | 50-125, 144-219 | 65.6 | 6e-18
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|