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IDSGR_545 TypeCDS
From630085 nt length237
To629849 aa length78
GenerpmB2 pI12.44
Definitionputative 50S ribosomal protein L28 M.W (Da)8570
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4642 putative ribosomal protein L28982.0e-22
coelSCO3429 putative 50S ribosomal protein L281181.0e-28
samSAM23877_4136 50S ribosomal subunit protein L281323.0e-43
kanCP970_19300 50S ribosomal protein L281352.0e-44
scabSCAB40011 putative ribosomal protein L281182.0e-28
saceSACE_0754 50S ribosomal protein L281103.0e-26
nfarnfa49750 putative ribosomal protein L281151.0e-27

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L281Ribosomal L28 family4-6087.25.5e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012377877.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >gb 4024.7e-50
WP_164363356.1 50S ribosomal protein L28 [Streptomyces griseus] >gb 4017.2e-50
WP_050362772.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >gb 4017.9e-50
WP_093564471.1 MULTISPECIES: 50S ribosomal protein L28 [unclassified Strept... 3991.5e-49
WP_030701964.1 50S ribosomal protein L28 [Streptomyces griseus] 3991.8e-49
WP_097924660.1 50S ribosomal protein L28 [Streptomyces sp. wa1063] 3982.0e-49
WP_097910490.1 50S ribosomal protein L28 [Streptomyces sp. b84] 3982.1e-49
WP_003964409.1 MULTISPECIES: 50S ribosomal protein L28 [unclassified Strept... 3982.5e-49
WP_056704763.1 MULTISPECIES: 50S ribosomal protein L28 [unclassified Strept... 3973.5e-49
WP_030584778.1 MULTISPECIES: 50S ribosomal protein L28 [Streptomyces] >lcl 3964.8e-49

PSORT result

LocalizationCertaintyPSORT said
Not Clear