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IDSGR_5466 TypeCDS
From6425074 nt length675
To6425748 aa length224
Gene pI5.27
Definitionconserved hypothetical protein M.W (Da)22174
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6172 putative membrane protein1554.0e-39
coelSCO2042 putative membrane protein2062.0e-54
samSAM23877_2129 conserved membrane protein of unknown function2137.0e-71
kanCP970_32490 TIGR02234 family membrane protein1672.0e-52
scabSCAB68461 putative membrane protein1793.0e-46

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Trp_oprn_chp1Tryptophan-associated transmembrane protein (Trp_oprn_chp)38-221183.33.3e-54

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_043392384.1 TIGR02234 family membrane protein [Streptomyces sp. ACT-1] >... 5574.4e-69
WP_012381330.1 MULTISPECIES: TIGR02234 family membrane protein [Streptomyce... 5565.5e-69
WP_030700978.1 TIGR02234 family membrane protein [Streptomyces griseus] 5531.5e-68
WP_089114852.1 TIGR02234 family membrane protein [Streptomyces sp. SS07] 5452.5e-67
WP_010064527.1 MULTISPECIES: TIGR02234 family membrane protein [Streptomyce... 5452.9e-67
WP_075266904.1 TIGR02234 family membrane protein [Streptomyces sp. Tue 6075... 5444.5e-67
WP_030583304.1 TIGR02234 family membrane protein [Streptomyces globisporus] 5435.1e-67
WP_097948549.1 TIGR02234 family membrane protein [Streptomyces sp. ms115] 5436.2e-67
NEB39017.1 TIGR02234 family membrane protein [Streptomyces sp. SID14515] 5428.8e-67
WP_103530373.1 TIGR02234 family membrane protein [Streptomyces sp. SM11] 5411.0e-66

PSORT result

LocalizationCertaintyPSORT said
Not Clear