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IDSGR_5523 TypeCDS
From6490443 nt length1194
To6489250 aa length397
GenelivK2 pI5.17
Definitionputative branched chain amino acid ABC transporter substrate-binding protein M.W (Da)41744
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6224 putative branched-chain amino acid ABC transporter substrate-binding protein3658.0e-102
coelSCO2008 putative periplasmic branched chain amino acid binding protein4532.0e-128
samSAM23877_2092 Branched chain amino acid binding protein4844.0e-172
kanCP970_32760 branched-chain amino acid ABC transporter substrate-binding protein4646.0e-164
scabSCAB68931 putative branched-chain amino acid ABC transporter substrate-binding protein5023.0e-143
nfarnfa18710 putative transporter1233.0e-29

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_61Periplasmic binding protein29-387165.81.9e-48

ANF_receptor1Receptor family ligand binding region51-37690.31.2e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EGE45147.1 Extracellular ligand-binding receptor [Streptomyces sp. ACT-1] >e... 18510.0e+00
WP_032774303.1 MULTISPECIES: branched-chain amino acid ABC transporter subs... 18480.0e+00
BAG22352.1 putative branched-chain amino acid ABC transporter substrate-bin... 18460.0e+00
WP_219206519.1 ABC transporter substrate-binding protein [Streptomyces gris... 18450.0e+00
WP_097916039.1 MULTISPECIES: branched-chain amino acid ABC transporter subs... 18390.0e+00
WP_073802047.1 MULTISPECIES: branched-chain amino acid ABC transporter subs... 18310.0e+00
WP_032794752.1 branched-chain amino acid ABC transporter substrate-binding ... 18300.0e+00
EHM24034.1 putative branched-chain amino acid ABC transporter substrate-bind... 18300.0e+00
GGY19869.1 branched chain amino acid ABC transporter substrate-binding prot... 18280.0e+00
WP_050358131.1 MULTISPECIES: branched-chain amino acid ABC transporter subs... 18250.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear