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IDSGR_5534 TypeCDS
From6505493 nt length1518
To6507010 aa length505
GenerpsA pI4.28
Definitionputative 30S ribosomal protein S1 M.W (Da)55040
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6233 putative ribosomal protein S18280.0e+00
coelSCO1998 30S ribosomal protein S19030.0e+00
samSAM23877_2081 30S ribosomal protein S18840.0e+00
kanCP970_32820 30S ribosomal protein S18990.0e+00
scabSCAB69061 putative ribosomal protein S19030.0e+00
saceSACE_5431 30S ribosomal protein S17690.0e+00
nfarnfa18970 putative ribosomal protein S17700.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

S14S1 RNA binding domain36-108, 124-191, 209-280, 294-366262.99.1e-80

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_111332891.1 MULTISPECIES: 30S ribosomal protein S1 [unclassified Strepto... 21190.0e+00
WP_124267717.1 30S ribosomal protein S1 [Streptomyces sp. ADI96-02] >gb 21180.0e+00
WP_136330605.1 MULTISPECIES: 30S ribosomal protein S1 [Streptomyces] >lcl 21170.0e+00
WP_109198822.1 30S ribosomal protein S1 [Streptomyces sp. CS014] >gb 21170.0e+00
WP_006123726.1 MULTISPECIES: 30S ribosomal protein S1 [Streptomyces] >lcl 21170.0e+00
WP_164400636.1 30S ribosomal protein S1 [Streptomyces sp. SID9727] >gb 21170.0e+00
WP_018512105.1 MULTISPECIES: 30S ribosomal protein S1 [Streptomycetaceae] >... 21170.0e+00
WP_018555634.1 MULTISPECIES: 30S ribosomal protein S1 [unclassified Strepto... 21160.0e+00
WP_030593748.1 MULTISPECIES: 30S ribosomal protein S1 [Streptomyces] >gb 21160.0e+00
WP_018488074.1 MULTISPECIES: 30S ribosomal protein S1 [unclassified Strepto... 21150.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear