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IDSGR_5538 TypeCDS
From6510012 nt length369
To6510380 aa length122
Gene pI6.98
Definitionconserved hypothetical protein M.W (Da)13658
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6236 hypothetical protein1436.0e-36
coelSCO1995 hypothetical protein1636.0e-42
samSAM23877_2078 hypothetical protein1605.0e-53
kanCP970_32845 tetratricopeptide repeat protein1742.0e-58
scabSCAB69091 hypothetical protein1604.0e-41

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TPR_141Tetratricopeptide repeat14-5144.88.2e-12

TPR_191Tetratricopeptide repeat19-7740.92e-10

TPR_171Tetratricopeptide repeat66-9630.23e-07

TPR_21Tetratricopeptide repeat77-10927.12.4e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381376.1 tetratricopeptide repeat protein [Streptomyces griseus] >gb 5233.7e-67
WP_030706361.1 tetratricopeptide repeat protein [Streptomyces griseus] 5201.4e-66
WP_003969830.1 MULTISPECIES: tetratricopeptide repeat protein [unclassified... 5149.5e-66
WP_096629112.1 tetratricopeptide repeat protein [Streptomyces sp. WZ.A104] ... 5087.8e-65
WP_164617943.1 tetratricopeptide repeat protein [Streptomyces sp. McG3] >lc... 5042.9e-64
WP_124267714.1 tetratricopeptide repeat protein [Streptomyces sp. ADI96-02]... 5035.2e-64
WP_032790381.1 MULTISPECIES: tetratricopeptide repeat protein [unclassified... 5001.2e-63
WP_109167563.1 MULTISPECIES: tetratricopeptide repeat protein [Streptomyces... 5001.5e-63
WP_097869710.1 tetratricopeptide repeat protein [Streptomyces sp. rh34] 4992.2e-63
WP_047176080.1 tetratricopeptide repeat protein [Streptomyces sp. MNU77] >g... 4983.0e-63

PSORT result

LocalizationCertaintyPSORT said
Not Clear