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IDSGR_5549 TypeCDS
From6522630 nt length711
To6523340 aa length236
Gene pI9.51
Definitionputative transcriptional regulator M.W (Da)25154
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2007 putative transcriptional regulator2423.0e-65
coelSCO6223 hypothetical protein2592.0e-70
samSAM23877_5961 Transcriptional regulator%2C HxlR family2252.0e-75
kanCP970_08130 transcriptional regulator2641.0e-90
scabSCAB18431 2562.0e-69
saceSACE_1244 transcriptional regulator1123.0e-26

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HxlR1HxlR-like helix-turn-helix36-12071.63.4e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012381386.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 8234.0e-109
EGE45177.1 transcriptional regulator, HxlR family [Streptomyces sp. ACT-1] >... 8201.1e-108
WP_030705138.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 8191.2e-108
WP_164362919.1 helix-turn-helix transcriptional regulator [Streptomyces gri... 8191.4e-108
WP_219206532.1 winged helix-turn-helix transcriptional regulator [Streptomy... 8157.1e-108
WP_093684894.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 8147.8e-108
WP_179887541.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 7401.7e-96
WP_219609484.1 winged helix-turn-helix transcriptional regulator [Streptomy... 7383.0e-96
WP_198958499.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 7373.9e-96
OKI80480.1 transcriptional regulator [Streptomyces sp. TSRI0395] 7374.8e-96

PSORT result

LocalizationCertaintyPSORT said
Not Clear